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AB3882

Anti-BAF53A 抗体 - ChIP Grade

Anti-BAF53A antibody - ChIP Grade

4

(2 Reviews)

|

(13 Publications)

Rabbit Polyclonal ACL6A antibody. Suitable for ChIP, WB and reacts with Human, Mouse, Rat samples. Cited in 13 publications.

別名を表示する

BAF53, BAF53A, INO80K, ACTL6A, Actin-like protein 6A, 53 kDa BRG1-associated factor A, Actin-related protein Baf53a, ArpNbeta, BRG1-associated factor 53A, INO80 complex subunit K

3 Images
ChIP - Anti-BAF53A antibody - ChIP Grade (AB3882)
  • ChIP

Collaborator

ChIP - Anti-BAF53A antibody - ChIP Grade (AB3882)

Sonicated Chromatin prepared from untreated (UI) or 17beta-estradiol (E2) treated MCF7 cells was subjected to the ChIP procedure with ab3882 to BAF53A and the immunoprecipitated chromatin was analysed in the proximal region of the estrogen-responsive pS2 promoter (as shown above) and quantified by real-time PCR (values are nomalized over inputs). The primers are designed to follow the nucleosome E (including the Estrogen Responsive Element ERE). 8 μl of ab3882 and 2x106 cells were used in each ChIP experiment.

This image is courtesy of Sylvain Daujat

Western blot - Anti-BAF53A antibody - ChIP Grade (AB3882)
  • WB

Project126****

Western blot - Anti-BAF53A antibody - ChIP Grade (AB3882)

All lanes:

Western blot - Anti-BAF53A antibody - ChIP Grade (ab3882) at 1 µg/mL

Lane 1:

Western blot - NIH/3T3 whole cell lysate (<a href='/products/cell-lysates/nih-3t3-whole-cell-lysate-ab7179'>ab7179</a>) at 10 µg

Lane 2:

MEF1 (Mouse embryonic fibroblast cell line) Whole Cell Lysate at 10 µg

Lane 3:

Western blot - Mouse skeletal muscle tissue lysate - total protein (<a href='/products/tissue-lysates/mouse-skeletal-muscle-tissue-lysate-total-protein-ab29711'>ab29711</a>) at 10 µg

Lane 4:

Ovary (Mouse) Tissue Lysate - normal tissue at 10 µg

Lane 5:

PC12 (Rat adrenal pheochromocytoma cell line) Whole Cell Lysate at 10 µg

Secondary

All lanes:

IRDye 680 Conjugated Goat Anti-Rabbit IgG (H+L) at 1/10000 dilution

Predicted band size: 47 kDa

Observed band size: 120 kDa,18 kDa,47 kDa

false

Western blot - Anti-BAF53A antibody - ChIP Grade (AB3882)
  • WB

Collaborator

Western blot - Anti-BAF53A antibody - ChIP Grade (AB3882)

Total extracts from two different clones of MCF7 (Human breast adenocarcinoma cell line) cells expressing a TAP tagged version of Tip60 were partially purified over IgG sepharose resin and eluted with TEV protease. Western blot was performed using a 1/1000 dilution of the BAF53A antibody.

Lane 1. TEV elution of Tip60-TAP clone #1
Lane 2. TEV elution of Tip60-TAP clone #2
Lane 3. Total extract of Tip60-TAP clone #1
Lane 4. Total extract of Tip60-TAP clone #2

NB : Tip60 is detected in the total extract due to the presence of Protein A in the TAP Tag (to which the primary and secondary abs bind). The TEV protease removes the Tag in lanes 1 and 2.

All lanes:

Western blot - Anti-BAF53A antibody - ChIP Grade (ab3882) at 1/1000 dilution

Lane 1:

TEV elution of Tip60-TAP clone 1

Lane 2:

TEV elution of Tip60-TAP clone 2

Lane 3:

Total extract of Tip60-TAP clone 1

Lane 4:

Total extract of Tip60-TAP clone 2

Predicted band size: 47 kDa

false

This image is courtesy of Jacques Cote, Universite Laval, Quebec, Canada

Key facts

宿主種

Rabbit

クローン性

Polyclonal

アイソタイプ

IgG

キャリアフリー

No

交差種

Mouse, Rat, Human

アプリケーション

WB, ChIP

applications

免疫原

The exact immunogen used to generate this antibody is proprietary information.

特異性

In Western blot, ab3882 detects BAF53 and Tip60-TAP in total extracts of Tip60-TAP.  Following TEV elution of Tip60-TAP ab3882 only detects BAF53. From Jan 2024, QC testing of replenishment batches of this polyclonal changed. All tested and expected application and reactive species combinations are still covered by our Abcam product promise. However, we no longer test all applications. For more information on a specific batch, please contact our Scientific Support who will be happy to help. From July 2024, QC testing of replenishment batches of this polyclonal changed. All tested and expected application and reactive species combinations are still covered by our Abcam product promise. However, we no longer test all applications. For more information on a specific batch, please contact our Scientific Support who will be happy to help.

Reactivity data

{ "title": "Reactivity Data", "filters": { "stats": ["", "Species", "Dilution Info", "Notes"], "tabs": { "all-applications": {"fullname" : "All Applications", "shortname": "All Applications"}, "ChIP" : {"fullname" : "ChIP", "shortname":"ChIP"}, "WB" : {"fullname" : "Western blot", "shortname":"WB"} }, "product-promise": { "all": "all", "testedAndGuaranteed": "tested", "guaranteed": "expected", "predicted": "predicted", "notRecommended": "not-recommended" } }, "values": { "Human": { "ChIP-species-checked": "guaranteed", "ChIP-species-dilution-info": "", "ChIP-species-notes": "<p></p>", "WB-species-checked": "testedAndGuaranteed", "WB-species-dilution-info": "1/1000", "WB-species-notes": "<p></p>" }, "Mouse": { "ChIP-species-checked": "guaranteed", "ChIP-species-dilution-info": "", "ChIP-species-notes": "<p></p>", "WB-species-checked": "testedAndGuaranteed", "WB-species-dilution-info": "1/1000", "WB-species-notes": "<p></p>" }, "Rat": { "ChIP-species-checked": "guaranteed", "ChIP-species-dilution-info": "", "ChIP-species-notes": "<p></p>", "WB-species-checked": "testedAndGuaranteed", "WB-species-dilution-info": "1/1000", "WB-species-notes": "<p></p>" } } }

出荷温度及び保存条件

製品の状態
Liquid
精製方法
Affinity purification Immunogen
バッファー組成
pH: 7.4 Preservative: 0.02% Sodium azide Constituents: PBS, 1% BSA
出荷温度
Blue Ice
短期保存期間
1-2 weeks
短期保存温度
+4°C
長期保存温度
-20°C
分注に関する情報
Upon delivery aliquot
保管に関する情報
Avoid freeze / thaw cycle

補足情報

This supplementary information is collated from multiple sources and compiled automatically.

The protein BAF53A also known as ACTL6A plays an important role in gene expression through chromatin remodeling. It is a subunit of the SWI/SNF-like BAF complex that is responsible for altering chromatin structure making it easier for transcription factors to access DNA. BAF53A has a molecular mass of approximately 53 kDa. It is highly expressed in neurons and plays an essential role in neurodevelopment and the regulation of neuronal gene expression.
Biological function summary

BAF53A is an integral component of the BAF chromatin remodeling complex. This complex modifies the positioning and accessibility of nucleosomes on chromatin thereby influencing gene transcription processes. BAF53A contributes to the regulation of genes involved in neuronal differentiation and development. The protein plays a significant role in neural stem cell proliferation and the regulation of progenitor cell fate.

Pathways

The BAF53A protein participates actively in the neural development and chromatin remodeling pathways. It interacts closely with the BAF complex to regulate the transcription of genes essential for neural differentiation and development. The BAF complex which includes BAF53A associates with proteins such as BRG1 and SMARCC1 facilitating the unfolding of chromatin to affect gene expression positively.

BAF53A is associated with neurodevelopmental disorders and certain types of cancer. Altered expression or mutations in BAF53A have been linked to neurodevelopmental issues contributing to conditions such as Autism Spectrum Disorders. Additionally overexpression of BAF53A connects to cancer particularly in glioblastoma where it influences tumor progression. In these contexts BAF53A interacts with oncogenes and tumor suppressor proteins playing a role in disease pathogenesis.

製品プロトコール

For this product, it's our understanding that no specific protocols are required. You can visit:

ターゲットの情報

Involved in transcriptional activation and repression of select genes by chromatin remodeling (alteration of DNA-nucleosome topology). Component of SWI/SNF chromatin remodeling complexes that carry out key enzymatic activities, changing chromatin structure by altering DNA-histone contacts within a nucleosome in an ATP-dependent manner. Required for maximal ATPase activity of SMARCA4/BRG1/BAF190A and for association of the SMARCA4/BRG1/BAF190A containing remodeling complex BAF with chromatin/nuclear matrix. Belongs to the neural progenitors-specific chromatin remodeling complex (npBAF complex) and is required for the proliferation of neural progenitors. During neural development a switch from a stem/progenitor to a postmitotic chromatin remodeling mechanism occurs as neurons exit the cell cycle and become committed to their adult state. The transition from proliferating neural stem/progenitor cells to postmitotic neurons requires a switch in subunit composition of the npBAF and nBAF complexes. As neural progenitors exit mitosis and differentiate into neurons, npBAF complexes which contain ACTL6A/BAF53A and PHF10/BAF45A, are exchanged for homologous alternative ACTL6B/BAF53B and DPF1/BAF45B or DPF3/BAF45C subunits in neuron-specific complexes (nBAF). The npBAF complex is essential for the self-renewal/proliferative capacity of the multipotent neural stem cells. The nBAF complex along with CREST plays a role regulating the activity of genes essential for dendrite growth (By similarity). Component of the NuA4 histone acetyltransferase (HAT) complex which is involved in transcriptional activation of select genes principally by acetylation of nucleosomal histones H4 and H2A. This modification may both alter nucleosome - DNA interactions and promote interaction of the modified histones with other proteins which positively regulate transcription. This complex may be required for the activation of transcriptional programs associated with oncogene and proto-oncogene mediated growth induction, tumor suppressor mediated growth arrest and replicative senescence, apoptosis, and DNA repair. NuA4 may also play a direct role in DNA repair when recruited to sites of DNA damage. Putative core component of the chromatin remodeling INO80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.
See full target information ACTL6A

文献 (13)

Recent publications for all applications. Explore the full list and refine your search

Nature communications 14:4193 PubMed37443154

2023

ACTL6A protects gastric cancer cells against ferroptosis through induction of glutathione synthesis.

Applications

Unspecified application

Species

Unspecified reactive species

Ziqing Yang,Shaomin Zou,Yijing Zhang,Jieping Zhang,Peng Zhang,Lishi Xiao,Yunling Xie,Manqi Meng,Junyan Feng,Liang Kang,Mong-Hong Lee,Lekun Fang

Cell death & disease 13:1049 PubMed36526622

2022

BAF53A drives colorectal cancer development by regulating DUSP5-mediated ERK phosphorylation.

Applications

Unspecified application

Species

Unspecified reactive species

Ziqing Yang,Dandan Huang,Manqi Meng,Wencong Wang,Junyan Feng,Lekun Fang,Honglei Chen,Shaomin Zou

iScience 25:104132 PubMed35434551

2022

ACTL6a coordinates axonal caliber recognition and myelination in the peripheral nerve.

Applications

Unspecified application

Species

Unspecified reactive species

Hye-Jin Park,Eric Tsai,Dennis Huang,Michael Weaver,Luciana Frick,Ace Alcantara,John J Moran,Julia Patzig,Carmen V Melendez-Vasquez,Gerald R Crabtree,M L Feltri,John Svaren,Patrizia Casaccia

eLife 9: PubMed32109204

2020

Integrated analysis of H2A.Z isoforms function reveals a complex interplay in gene regulation.

Applications

Unspecified application

Species

Unspecified reactive species

Assala Lamaa,Jonathan Humbert,Marion Aguirrebengoa,Xue Cheng,Estelle Nicolas,Jacques Côté,Didier Trouche

Nature genetics 51:26-29 PubMed30510238

2018

SWI/SNF remains localized to chromatin in the presence of SCHLAP1.

Applications

Unspecified application

Species

Unspecified reactive species

Jesse R Raab,Keriayn N Smith,Camarie C Spear,Carl J Manner,J Mauro Calabrese,Terry Magnuson

Nature communications 6:7299 PubMed26095369

2015

TRIM29 regulates the assembly of DNA repair proteins into damaged chromatin.

Applications

Unspecified application

Species

Human

Yasushi Masuda,Hidehisa Takahashi,Shigeo Sato,Chieri Tomomori-Sato,Anita Saraf,Michael P Washburn,Laurence Florens,Ronald C Conaway,Joan W Conaway,Shigetsugu Hatakeyama

Stem cells (Dayton, Ohio) 33:1782-93 PubMed25802002

2015

Actl6a protects embryonic stem cells from differentiating into primitive endoderm.

Applications

Unspecified application

Species

Unspecified reactive species

Weisi Lu,Lekun Fang,Bin Ouyang,Xiya Zhang,Shaoquan Zhan,Xuyang Feng,Yaofu Bai,Xin Han,Hyeung Kim,Quanyuan He,Ma Wan,Feng-Tao Shi,Xin-Hua Feng,Dan Liu,Junjiu Huang,Zhou Songyang

Nucleic acids research 42:2958-75 PubMed24335282

2013

Analysis of the SWI/SNF chromatin-remodeling complex during early heart development and BAF250a repression cardiac gene transcription during P19 cell differentiation.

Applications

IHC-P

Species

Mouse

Ajeet Pratap Singh,Trevor K Archer

Cell reports 4:589-600 PubMed23911284

2013

Locus-specific proteomics by TChP: targeted chromatin purification.

Applications

WB

Species

Human

Farzin Pourfarzad,Ali Aghajanirefah,Ernie de Boer,Sara Ten Have,Thamar Bryn van Dijk,Sima Kheradmandkia,Ralph Stadhouders,Supat Thongjuea,Eric Soler,Nynke Gillemans,Marieke von Lindern,Jeroen Demmers,Sjaak Philipsen,Frank Grosveld

Oncogene 33:2354-62 PubMed23728344

2013

Failure to downregulate the BAF53a subunit of the SWI/SNF chromatin remodeling complex contributes to the differentiation block in rhabdomyosarcoma.

Applications

Unspecified application

Species

Unspecified reactive species

R Taulli,V Foglizzo,D Morena,D M Coda,U Ala,F Bersani,N Maestro,C Ponzetto
View all publications

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