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WB
.
PubMed: 29371649
Mito M et al.Cell Type-Specific Survey of Epigenetic Modifications by Tandem Chromatin Immunoprecipitation Sequencing.Sci Rep 8:1143 (2018).
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Borroni AP et al.Smurf2 regulates stability and the autophagic-lysosomal turnover of lamin A and its disease-associated form progerin.Aging Cell 17:N/A (2018).
WB
.
PubMed: 29405587
Ranieri A et al.ß-Adrenergic regulation of cardiac type 2A protein phosphatase through phosphorylation of regulatory subunit B56d at S573.J Mol Cell Cardiol 115:20-31 (2018).
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Monteverde T et al.Calcium signalling links MYC to NUAK1.Oncogene 37:982-992 (2018).
PubMed: 29106388
Klattenhoff AW et al.Loss of NEIL3 DNA glycosylase markedly increases replication associated double strand breaks and enhances sensitivity to ATR inhibitor in glioblastoma cells.Oncotarget 8:112942-112958 (2017).
PubMed: 29348879
Aze A et al.RNAs coordinate nuclear envelope assembly and DNA replication through ELYS recruitment to chromatin.Nat Commun 8:2130 (2017).
PubMed: 29242643
Davey GE et al.Nucleosome acidic patch-targeting binuclear ruthenium compounds induce aberrant chromatin condensation.Nat Commun 8:1575 (2017).
PubMed: 29146919
Porro A et al.FAN1 interaction with ubiquitylated PCNA alleviates replication stress and preserves genomic integrity independently of BRCA2.Nat Commun 8:1073 (2017).
PubMed: 29051491
Shimamoto Y et al.Nucleosome-nucleosome interactions via histone tails and linker DNA regulate nuclear rigidity.Mol Biol Cell 28:1580-1589 (2017).
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Kushwaha NK et al.The replication initiator protein of a geminivirus interacts with host monoubiquitination machinery and stimulates transcription of the viral genome.PLoS Pathog 13:e1006587 (2017).
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Li X et al.Enzymatic modules of the SAGA chromatin-modifying complex play distinct roles inDrosophilagene expression and development.Genes Dev 31:1588-1600 (2017).
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Zhu S et al.Protein phosphatase 1 and phosphatase 1 nuclear targeting subunit-dependent regulation of DNA-dependent protein kinase and non-homologous end joining.Nucleic Acids Res 45:10583-10594 (2017).
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Ma J et al.Reversing drug resistance of soft tumor-repopulating cells by tumor cell-derived chemotherapeutic microparticles.Cell Res 26:713-27 (2016).
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Saredi G et al.H4K20me0 marks post-replicative chromatin and recruits the TONSL–MMS22L DNA repair complex.Nature 534:714-718 (2016).
WB
.
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Shirakawa K et al.Salicylate, diflunisal and their metabolites inhibit CBP/p300 and exhibit anticancer activity.Elife 5:N/A (2016).
WB
.
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WB
.
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Petty EL et al.Promotion of Cell Viability and Histone Gene Expression by the Acetyltransferase Gcn5 and the Protein Phosphatase PP2A in Saccharomyces cerevisiae.Genetics 203:1693-707 (2016).
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Harwardt T et al.Human Cytomegalovirus Immediate-Early 1 Protein Rewires Upstream STAT3 to Downstream STAT1 Signaling Switching an IL6-Type to an IFN?-Like Response.PLoS Pathog 12:e1005748 (2016).
PubMed: 27387064
Hirosawa M et al.Novel O-GlcNAcylation on Ser(40) of canonical H2A isoforms specific to viviparity.Sci Rep 6:31785 (2016).
PubMed: 27615797
Toompuu M et al.ABCE1 is essential for S phase progression in human cells.Cell Cycle 15:1234-47 (2016).
WB
;
Human
.
PubMed: 26985706
Kfir N et al.SF3B1 association with chromatin determines splicing outcomes.Cell Rep 11:618-29 (2015).
PubMed: 25892229
Massart R et al.Role of DNA methylation in the nucleus accumbens in incubation of cocaine craving.J Neurosci 35:8042-58 (2015).
WB
;
Rat
.
PubMed: 26019323
Yao X et al.The Mediator subunit MED23 couples H2B mono-ubiquitination to transcriptional control and cell fate determination.EMBO J 34:2885-902 (2015).
WB
.
PubMed: 26330467
Poitelon Y et al.
Spatial mapping of juxtacrine axo-glial interactions identifies novel molecules in peripheral myelination.
Nat Commun 6:8303 (2015).
WB
;
Rat
.
PubMed: 26383514
Tvardovskiy A et al.
Top-down and Middle-down Protein Analysis Reveals that Intact and Clipped Human Histones Differ in Post-translational Modification Patterns.
Mol Cell Proteomics 14:3142-53 (2015).
WB
;
Human
.
PubMed: 26424599
Li X et al.BRHIS1 suppresses rice innate immunity through binding to monoubiquitinated H2A and H2B variants.EMBO Rep 16:1192-202 (2015).
Rice
.
PubMed: 26202491
Kang C et al.PGC-1a overexpression by in vivo transfection attenuates mitochondrial deterioration of skeletal muscle caused by immobilization.FASEB J 29:4092-106 (2015).
WB
;
Mouse
.
PubMed: 26178167
Rønningen T et al.Pre-patterning of differentiation-driven nuclear lamin A/C-associated chromatin domains by GlcNAcylated histone H2B.Genome Res N/A:N/A (2015).
ChIP
;
Human
.
PubMed: 26359231
Ishii H et al.
MPE-seq, a new method for the genome-wide analysis of chromatin structure.
Proc Natl Acad Sci U S A 112:E3457-65 (2015).
ChIP
;
Mouse
.
PubMed: 26080409
Milev MP et al.TRAMM/TrappC12 plays a role in chromosome congression, kinetochore stability, and CENP-E recruitment.J Cell Biol 209:221-34 (2015).
WB, ICC/IF
;
Human
.
PubMed: 25918224
Kosinsky RL et al.Usp22 deficiency impairs intestinal epithelial lineage specification in vivo.Oncotarget 6:37906-18 (2015).
WB, IHC
.
PubMed: 26431380
Cao QF et al.Characterization of the Human Transcription Elongation Factor Rtf1: Evidence for Nonoverlapping Functions of Rtf1 and the Paf1 Complex.Mol Cell Biol 35:3459-70 (2015).
PubMed: 26217014
Di Donato DM et al.Influence of aerobic exercise intensity on myofibrillar and mitochondrial protein synthesis in young men during early and late postexercise recovery.Am J Physiol Endocrinol Metab 306:E1025-32 (2014).
PubMed: 24595306
Waidmann S et al.A DEK domain-containing protein modulates chromatin structure and function in Arabidopsis.Plant Cell 26:4328-44 (2014).
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Bledau AS et al.The H3K4 methyltransferase Setd1a is first required at the epiblast stage, whereas Setd1b becomes essential after gastrulation.Development 141:1022-35 (2014).
PubMed: 24550110
Alabert C et al.Nascent chromatin capture proteomics determines chromatin dynamics during DNA replication and identifies unknown fork components.Nat Cell Biol 16:281-93 (2014).
PubMed: 24561620
Klement K et al.Opposing ISWI- and CHD-class chromatin remodeling activities orchestrate heterochromatic DNA repair.J Cell Biol 207:717-33 (2014).
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Mao P et al.UV damage-induced RNA polymerase II stalling stimulates H2B deubiquitylation.Proc Natl Acad Sci U S A 111:12811-6 (2014).
WB
.
PubMed: 25136098
Cieniewicz AM et al.The bromodomain of Gcn5 regulates site specificity of lysine acetylation on histone H3.Mol Cell Proteomics 13:2896-910 (2014).
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Günesdogan U et al.Histone supply regulates S phase timing and cell cycle progression.Elife 3:e02443 (2014).
WB
.
PubMed: 25205668
Bowman CJ et al.Foxk proteins repress the initiation of starvation-induced atrophy and autophagy programs.Nat Cell Biol 16:1202-14 (2014).
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Cecere G et al.Global effects of the CSR-1 RNA interference pathway on the transcriptional landscape.Nat Struct Mol Biol 21:358-65 (2014).
WB
.
PubMed: 24681887
Mücke K et al.Human cytomegalovirus major immediate early 1 protein targets host chromosomes by docking to the acidic pocket on the nucleosome surface.J Virol 88:1228-48 (2014).
WB
;
Human
.
PubMed: 24227840
Gallego-Paez LM et al.Smc5/6-mediated regulation of replication progression contributes to chromosome assembly during mitosis in human cells.Mol Biol Cell 25:302-17 (2014).
Human
.
PubMed: 24258023
Bedi U et al.SUPT6H controls estrogen receptor activity and cellular differentiation by multiple epigenomic mechanisms.Oncogene N/A:N/A (2014).
Human
.
PubMed: 24441044
Davies GF et al.TFPI1 mediates resistance to doxorubicin in breast cancer cells by inducing a hypoxic-like response.PLoS One 9:e84611 (2014).
Human
.
PubMed: 24489651
Vidi PA et al.NuMA promotes homologous recombination repair by regulating the accumulation of the ISWI ATPase SNF2h at DNA breaks.Nucleic Acids Res 42:6365-79 (2014).
WB
.
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Latreille D et al.Identification of histone 3 variant 2 interacting factors.Nucleic Acids Res 42:3542-50 (2014).
WB
.
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Mohni KN et al.ATR pathway inhibition is synthetically lethal in cancer cells with ERCC1 deficiency.Cancer Res 74:2835-45 (2014).
PubMed: 24662920
Carvalho S et al.SETD2 is required for DNA double-strand break repair and activation of the p53-mediated checkpoint.Elife 3:e02482 (2014).
WB
;
Human
.
PubMed: 24843002
Inoue A & Zhang Y Nucleosome assembly is required for nuclear pore complex assembly in mouse zygotes.Nat Struct Mol Biol 21:609-16 (2014).
WB, IP
;
Mouse
.
PubMed: 24908396
Teirilä L et al.Proteomic changes of alveolar lining fluid in illnesses associated with exposure to inhaled non-infectious microbial particles.PLoS One 9:e102624 (2014).
WB
;
Human
.
PubMed: 25033447
Keam SP et al.The human Piwi protein Hiwi2 associates with tRNA-derived piRNAs in somatic cells.Nucleic Acids Res 42:8984-95 (2014).
WB
;
Human
.
PubMed: 25038252
Pfaff KL & King RW Determinants of human cyclin B1 association with mitotic chromosomes.PLoS One 8:e59169 (2013).
WB
;
Human
.
PubMed: 23505570
de Oliveira RV et al.Molecular morphology and function of bull spermatozoa linked to histones and associated with fertility.Reproduction 146:263-72 (2013).
PubMed: 23904564
Wells CE et al.Inhibition of histone deacetylase 3 causes replication stress in cutaneous T cell lymphoma.PLoS One 8:e68915 (2013).
WB
;
Mouse
.
PubMed: 23894374
Zalckvar E et al.Nucleosome maps of the human cytomegalovirus genome reveal a temporal switch in chromatin organization linked to a major IE protein.Proc Natl Acad Sci U S A 110:13126-31 (2013).
ChIP
;
Human
.
PubMed: 23878222
Kang C et al.Exercise training attenuates aging-associated mitochondrial dysfunction in rat skeletal muscle: Role of PGC-1a.Exp Gerontol 48:1343-50 (2013).
PubMed: 23994518
Goldstein M et al.Nucleolin mediates nucleosome disruption critical for DNA double-strand break repair.Proc Natl Acad Sci U S A 110:16874-9 (2013).
ChIP
.
PubMed: 24082117
Millán-Zambrano G et al.The prefoldin complex regulates chromatin dynamics during transcription elongation.PLoS Genet 9:e1003776 (2013).
ChIP
;
Saccharomyces cerevisiae
.
PubMed: 24068951
Fradet-Turcotte A et al.53BP1 is a reader of the DNA-damage-induced H2A Lys 15 ubiquitin mark.Nature 499:50-4 (2013).
PubMed: 23760478
Dreveny I et al.The double PHD finger domain of MOZ/MYST3 induces a-helical structure of the histone H3 tail to facilitate acetylation and methylation sampling and modification.Nucleic Acids Res N/A:N/A (2013).
WB
;
Human
.
PubMed: 24150941
Ramos I et al.The intrinsically disordered distal face of nucleoplasmin recognizes distinct oligomerization states of histones.Nucleic Acids Res N/A:N/A (2013).
WB, IP
;
Xenopus laevis
.
PubMed: 24121686
DeGennaro CM et al.Spt6 regulates intragenic and antisense transcription, nucleosome positioning, and histone modifications genome-wide in fission yeast.Mol Cell Biol 33:4779-92 (2013).
WB
.
PubMed: 24100010
Kang C & Ji LL Muscle immobilization and remobilization downregulates PGC-1a signaling and the mitochondrial biogenesis pathway.J Appl Physiol (1985) 115:1618-25 (2013).
WB
;
Mouse
.
PubMed: 23970536
Maselli J et al.The effects of chemotherapy with bleomycin, etoposide, and cis-platinum (BEP) on rat sperm chromatin remodeling, fecundity and testicular gene expression in the progeny.Biol Reprod 89:85 (2013).
PubMed: 23986570
Ivanov A et al.Lysosome-mediated processing of chromatin in senescence.J Cell Biol 202:129-43 (2013).
IHC
.
PubMed: 23816621
Kogure M et al.The oncogenic polycomb histone methyltransferase EZH2 methylates lysine 120 on histone H2B and competes ubiquitination.Neoplasia 15:1251-61 (2013).
PubMed: 24339737
Valin A et al.Transcription factor Sp3 represses expression of p21CIP¹ via inhibition of productive elongation by RNA polymerase II.Mol Cell Biol 33:1582-93 (2013).
PubMed: 23401853
Wadelin FR et al.PRAME is a golgi-targeted protein that associates with the Elongin BC complex and is upregulated by interferon-gamma and bacterial PAMPs.PLoS One 8:e58052 (2013).
PubMed: 23460923
Allison R et al.An ESCRT-spastin interaction promotes fission of recycling tubules from the endosome.J Cell Biol 202:527-43 (2013).
PubMed: 23897888
Avgousti DC et al.CSR-1 RNAi pathway positively regulates histone expression in C. elegans.EMBO J 31:3821-32 (2012).
WB
.
PubMed: 22863779
Vethantham V et al.Dynamic loss of H2B ubiquitylation without corresponding changes in H3K4 trimethylation during myogenic differentiation.Mol Cell Biol 32:1044-55 (2012).
ChIP
;
Mouse
.
PubMed: 22252316
Panier S et al.Tandem protein interaction modules organize the ubiquitin-dependent response to DNA double-strand breaks.Mol Cell 47:383-95 (2012).
PubMed: 22742833
Fujimoto M et al.RPA assists HSF1 access to nucleosomal DNA by recruiting histone chaperone FACT.Mol Cell 48:182-94 (2012).
PubMed: 22940245
Maselli J et al.Exposure to bleomycin, etoposide, and cis-platinum alters rat sperm chromatin integrity and sperm head protein profile.Biol Reprod 86:166, 1-10 (2012).
WB
.
PubMed: 22402960
Urasaki Y et al.Coupling of glucose deprivation with impaired histone H2B monoubiquitination in tumors.PLoS One 7:e36775 (2012).
PubMed: 22615809
Petter M et al.Expression of P. falciparum var genes involves exchange of the histone variant H2A.Z at the promoter.PLoS Pathog 7:e1001292 (2011).
PubMed: 21379342
Kim J & Roeder RG Nucleosomal H2B ubiquitylation with purified factors.Methods 54:331-8 (2011).
PubMed: 21443952
Miyamoto K et al.Nuclear actin polymerization is required for transcriptional reprogramming of Oct4 by oocytes.Genes Dev 25:946-58 (2011).
WB
;
Xenopus laevis
.
PubMed: 21536734
Sirbu BM et al.Analysis of protein dynamics at active, stalled, and collapsed replication forks.Genes Dev 25:1320-7 (2011).
PubMed: 21685366
Lopez-Atalaya JP et al.Histone acetylation deficits in lymphoblastoid cell lines from patients with Rubinstein-Taybi syndrome.J Med Genet : (2011).
PubMed: 21984751
Lee KH et al.The RPT2 subunit of the 26S proteasome directs complex assembly, histone dynamics, and gametophyte and sporophyte development in Arabidopsis.Plant Cell 23:4298-317 (2011).
PubMed: 22158466
Thepparit C et al.Interaction of Rickettsia felis with histone H2B facilitates the infection of a tick cell line.Microbiology 156:2855-63 (2010).
WB
.
PubMed: 20558510
Morillo-Huesca M et al.The SWR1 histone replacement complex causes genetic instability and genome-wide transcription misregulation in the absence of H2A.Z.PLoS One 5:e12143 (2010).
ChIP
;
Saccharomyces cerevisiae
.
PubMed: 20711347
Franklin S et al.Specialized compartments of cardiac nuclei exhibit distinct proteomic anatomy.Mol Cell Proteomics : (2010).
WB
;
Mouse
.
PubMed: 20807835
Thakar A et al.BRCA1/BARD1 E3 ubiquitin ligase can modify histones H2A and H2B in the nucleosome particle.J Biomol Struct Dyn 27:399-406 (2010).
WB
;
Human
.
PubMed: 19916563
Darwanto A et al.A modified "cross-talk" between histone H2B Lys-120 ubiquitination and H3 Lys-79 methylation.J Biol Chem 285:21868-76 (2010).
WB
;
Human
.
PubMed: 20442396
Gatta R & Mantovani R Single nucleosome ChIPs identify an extensive switch of acetyl marks on cell cycle promoters.Cell Cycle 9: (2010).
ChIP
;
Human
.
PubMed: 20505338
Fassier C et al.Zebrafish atlastin controls motility and spinal motor axon architecture via inhibition of the BMP pathway.Nat Neurosci 13:1380-7 (2010).
WB
;
Zebrafish
.
PubMed: 20935645
Kutluay SB & Triezenberg SJ Regulation of histone deposition on the herpes simplex virus type 1 genome during lytic infection.J Virol 83:5835-45 (2009).
ChIP
;
Human
.
PubMed: 19321615
Egloff S et al.Chromatin structure is implicated in "late" elongation checkpoints on the U2 snRNA and beta-actin genes.Mol Cell Biol 29:4002-13 (2009).
ChIP
;
Human
.
PubMed: 19451231
Schmitz RJ et al.Histone H2B deubiquitination is required for transcriptional activation of FLOWERING LOCUS C and for proper control of flowering in Arabidopsis.Plant Physiol 149:1196-204 (2009).
WB
;
Arabidopsis thaliana
.
PubMed: 19091875
Koshibu K et al.Protein phosphatase 1 regulates the histone code for long-term memory.J Neurosci 29:13079-89 (2009).
WB
;
Mouse
.
PubMed: 19828821
Tjeertes JV et al.Screen for DNA-damage-responsive histone modifications identifies H3K9Ac and H3K56Ac in human cells.EMBO J 28:1878-89 (2009).
WB
;
Human
.
PubMed: 19407812
Chen Y et al.DSIF, the Paf1 complex, and Tat-SF1 have nonredundant, cooperative roles in RNA polymerase II elongation.Genes Dev 23:2765-77 (2009).
WB
;
Human
.
PubMed: 19952111
Klooster R et al.Comprehensive expression analysis of FSHD candidate genes at the mRNA and protein level.Eur J Hum Genet 17:1615-24 (2009).
WB
;
Human
.
PubMed: 19809486
Fang X et al.The higher structure of chromatin in the LCR of the beta-globin locus changes during development.J Mol Biol 394:197-208 (2009).
ChIP
;
Mouse
.
PubMed: 19781549
Raymond B et al.Anthrax lethal toxin impairs IL-8 expression in epithelial cells through inhibition of histone H3 modification.PLoS Pathog 5:e1000359 (2009).
PubMed: 19343203
Minsky N et al.Monoubiquitinated H2B is associated with the transcribed region of highly expressed genes in human cells.Nat Cell Biol 10:483-8 (2008).
WB, ChIP
;
Human
.
PubMed: 18344985
Donati G et al.An NF-Y-dependent switch of positive and negative histone methyl marks on CCAAT promoters.PLoS ONE 3:e2066 (2008).
ChIP
;
Human
.
PubMed: 18446193
Nitzsche A et al.Temporal Dynamics of Cytomegalovirus Chromatin Assembly in Productively Infected Human Cells.J Virol : (2008).
PubMed: 18786996
Camahort R et al.Scm3 is essential to recruit the histone h3 variant cse4 to centromeres and to maintain a functional kinetochore.Mol Cell 26:853-65 (2007).
WB
;
Saccharomyces cerevisiae
.
PubMed: 17569568
Koch CM et al.The landscape of histone modifications across 1% of the human genome in five human cell lines.Genome Res 17:691-707 (2007).
ChIP/Chip
;
Human
.
PubMed: 17567990
Deal RB et al.Repression of flowering in Arabidopsis requires activation of FLOWERING LOCUS C expression by the histone variant H2A.Z.Plant Cell 19:74-83 (2007).
ChIP
;
Arabidopsis thaliana
.
PubMed: 17220196
Yin W et al.Histone acetylation at the human beta-globin locus changes with developmental age.Blood 110:4101-7 (2007).
PubMed: 17881636
Köhler A et al.The mRNA export factor Sus1 is involved in Spt/Ada/Gcn5 acetyltransferase-mediated H2B deubiquitinylation through its interaction with Ubp8 and Sgf11.Mol Biol Cell 17:4228-36 (2006).
PubMed: 16855026
Agelopoulos M & Thanos D Epigenetic determination of a cell-specific gene expression program by ATF-2 and the histone variant macroH2A.EMBO J 25:4843-53 (2006).
PubMed: 17036053
Adkins MW & Tyler JK The histone chaperone Asf1p mediates global chromatin disassembly in vivo.J Biol Chem 279:52069-74 (2004).
PubMed: 15452122
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