Anti-Histone H3 (tri methyl K4) antibody - ChIP Grade (ab8580)

ab8580 has been referenced in 226 publications.

1. Sauer S et al. T cell receptor signaling controls Foxp3 expression via PI3K, Akt, and mTOR. Proc Natl Acad Sci U S A : (2008). ChIP; Fruit fly (Drosophila melanogaster). PubMed: 18509048
2. Roh TY et al. The genomic landscape of histone modifications in human T cells. Proc Natl Acad Sci U S A 103:15782-7 (2006). ChIP; Human. PubMed: 17043231
3. Kwon T et al. Mechanism of histone lysine methyl transfer revealed by the structure of SET7/9-AdoMet. EMBO J 22:292-303 (2003). PubMed: 12514135
4. Santos-Rosa H et al. Active genes are tri-methylated at K4 of histone H3. Nature 419:407-11 (2002). PubMed: 12353038
5. Wu MF et al. SWI2/SNF2 chromatin remodeling ATPases overcome polycomb repression and control floral organ identity with the LEAFY and SEPALLATA3 transcription factors. Proc Natl Acad Sci U S A 109:3576-81 (2012). ChIP. PubMed: 22323601
6. Youn MY et al. JMJD5, a Jumonji C (JmjC) Domain-containing Protein, Negatively Regulates Osteoclastogenesis by Facilitating NFATc1 Protein Degradation. J Biol Chem 287:12994-3004 (2012). ICC/IF; Human. PubMed: 22375008
7. Wu SF et al. Genes for embryo development are packaged in blocks of multivalent chromatin in zebrafish sperm. Genome Res 21:578-89 (2011). WB; Zebrafish. PubMed: 21383318
8. Liu Y et al. Ab initio identification of transcription start sites in the Rhesus macaque genome by histone modification and RNA-Seq. Nucleic Acids Res 39:1408-18 (2011). CHIPseq; Macaque Monkey. PubMed: 20952408
9. Tozawa H et al. Genome-Wide Approaches Reveal Functional Interleukin-4-Inducible STAT6 Binding to the Vascular Cell Adhesion Molecule 1 Promoter. Mol Cell Biol 31:2196-209 (2011). PubMed: 21464207
10. Valenzuela MS et al. Preferential localization of human origins of DNA replication at the 5'-ends of expressed genes and at evolutionarily conserved DNA sequences. PLoS One 6:e17308 (2011). ChIP; Human. PubMed: 21602917
11. Vernimmen D et al. Polycomb eviction as a new distant enhancer function. Genes Dev 25:1583-8 (2011). ChIP; Mouse. PubMed: 21828268
12. Stevens JR et al. FACT, the Bur Kinase Pathway, and the Histone Co-Repressor HirC Have Overlapping Nucleosome-Related Roles in Yeast Transcription Elongation. PLoS One 6:e25644 (2011). WB; Saccharomyces cerevisiae. PubMed: 22022426
13. Szulwach KE et al. Cross talk between microRNA and epigenetic regulation in adult neurogenesis. J Cell Biol 189:127-41 (2010). PubMed: 20368621
14. Hajji N et al. Opposing effects of hMOF and SIRT1 on H4K16 acetylation and the sensitivity to the topoisomerase II inhibitor etoposide. Oncogene : (2010). WB; Human. PubMed: 20118981
15. Maass PG et al. A cis-regulatory site downregulates PTHLH in translocation t(8;12)(q13;p11.2) and leads to Brachydactyly Type E. Hum Mol Genet 19:848-60 (2010). ChIP; Human. PubMed: 20015959
16. Dahl JA et al. Histone h3 lysine 27 methylation asymmetry on developmentally-regulated promoters distinguish the first two lineages in mouse preimplantation embryos. PLoS One 5:e9150 (2010). ChIP; Mouse. PubMed: 20161773
17. Tao Y et al. Lsh Mediated RNA Polymerase II Stalling at HoxC6 and HoxC8 Involves DNA Methylation. PLoS One 5:e9163 (2010). WB; Mouse. PubMed: 20161795
18. Obier N & Müller AM Chromatin flow cytometry identifies changes in epigenetic cell states. Cells Tissues Organs 191:167-74 (2010). Flow Cyt; Mouse. PubMed: 19776550
19. Sun J & Li R Human negative elongation factor activates transcription and regulates alternative transcription initiation. J Biol Chem 285:6443-52 (2010). ChIP; Human. PubMed: 20028984
20. Rodriguez C et al. CTCF is a DNA methylation-sensitive positive regulator of the INK/ARF locus. Biochem Biophys Res Commun 392:129-34 (2010). ChIP. PubMed: 20051228
21. Pedrosa E et al. ChIP-chip analysis of neurexins and other candidate genes for addiction and neuropsychiatric disorders. J Neurogenet 24:5-17 (2010). PubMed: 19968605
22. Agarwal S et al. Telomere elongation in induced pluripotent stem cells from dyskeratosis congenita patients. Nature 464:292-6 (2010). ChIP; Human. PubMed: 20164838
23. Coolen MW et al. Consolidation of the cancer genome into domains of repressive chromatin by long-range epigenetic silencing (LRES) reduces transcriptional plasticity. Nat Cell Biol 12:235-46 (2010). ChIP; Human. PubMed: 20173741
24. Lu TY et al. Epithelial cell adhesion molecule regulation is associated with the maintenance of the undifferentiated phenotype of human embryonic stem cells. J Biol Chem 285:8719-32 (2010). ChIP; Human. PubMed: 20064925
25. Wen H et al. Recognition of Histone H3K4 Trimethylation by the Plant Homeodomain of PHF2 Modulates Histone Demethylation. J Biol Chem 285:9322-6 (2010). ICC/IF; Human. PubMed: 20129925
26. Ribarska T et al. Epigenetic inactivation of the placentally imprinted tumor suppressor gene TFPI2 in prostate carcinoma. Cancer Genomics Proteomics 7:51-60 (2010). ChIP; Human. PubMed: 20335518
27. Goldberg AD et al. Distinct factors control histone variant H3.3 localization at specific genomic regions. Cell 140:678-91 (2010). PubMed: 20211137
28. Ceru S et al. Stefin B interacts with histones and cathepsin L in the nucleus. J Biol Chem 285:10078-86 (2010). WB; Human. PubMed: 20075068
29. Ghisletti S et al. Identification and characterization of enhancers controlling the inflammatory gene expression program in macrophages. Immunity 32:317-28 (2010). ChIP; Mouse. PubMed: 20206554
30. Chia DJ et al. Distinct alterations in chromatin organization of the two IGF-I promoters precede growth hormone-induced activation of IGF-I gene transcription. Mol Endocrinol 24:779-89 (2010). ChIP; Rat. PubMed: 20160126
31. Seenundun S et al. UTX mediates demethylation of H3K27me3 at muscle-specific genes during myogenesis. EMBO J 29:1401-11 (2010). ChIP; Mouse. PubMed: 20300060
32. Yu J et al. An integrated network of androgen receptor, polycomb, and TMPRSS2-ERG gene fusions in prostate cancer progression. Cancer Cell 17:443-54 (2010). ChIP; Human. PubMed: 20478527
33. Liu C et al. Epigenetic regulation of miR-184 by MBD1 governs neural stem cell proliferation and differentiation. Cell Stem Cell 6:433-44 (2010). ChIP; Mouse. PubMed: 20452318
34. Panicker LM et al. Nuclear localization of the G protein beta5/R7-regulator of G protein signaling protein complex is dependent on R7 binding protein. J Neurochem : (2010). WB; Mouse. PubMed: 20100282
35. Horáková AH et al. SUV39h-independent association of HP1 beta with fibrillarin-positive nucleolar regions. Chromosoma 119:227-41 (2010). WB, ChIP; Mouse. PubMed: 20033197
36. Aiden AP et al. Wilms tumor chromatin profiles highlight stem cell properties and a renal developmental network. Cell Stem Cell 6:591-602 (2010). ChIP; Human. PubMed: 20569696
37. Lengner CJ et al. Derivation of pre-X inactivation human embryonic stem cells under physiological oxygen concentrations. Cell 141:872-83 (2010). ChIP; Human. PubMed: 20471072
38. Kanhere A et al. Short RNAs are transcribed from repressed polycomb target genes and interact with polycomb repressive complex-2. Mol Cell 38:675-88 (2010). PubMed: 20542000
39. Earley KW et al. Mechanisms of HDA6-mediated rRNA gene silencing: suppression of intergenic Pol II transcription and differential effects on maintenance versus siRNA-directed cytosine methylation. Genes Dev 24:1119-32 (2010). ChIP. PubMed: 20516197
40. Gerlitz G & Bustin M Efficient cell migration requires global chromatin condensation. J Cell Sci 123:2207-17 (2010). ICC/IF; Mouse. PubMed: 20530575
41. Muntean AG et al. The PAF complex synergizes with MLL fusion proteins at HOX loci to promote leukemogenesis. Cancer Cell 17:609-21 (2010). PubMed: 20541477
42. Gómez-Cabello D et al. Regulation of the microRNA processor DGCR8 by the tumor suppressor ING1. Cancer Res 70:1866-74 (2010). ChIP; Mouse. PubMed: 20179197
43. Chen LT et al. Involvement of Arabidopsis histone deacetylase HDA6 in ABA and salt stress response. J Exp Bot 61:3345-53 (2010). ChIP; Arabidopsis thaliana. PubMed: 20519338
44. Lui JC et al. Coordinated postnatal down-regulation of multiple growth-promoting genes: evidence for a genetic program limiting organ growth. FASEB J 24:3083-92 (2010). ChIP/Chip; Mouse. PubMed: 20371622
45. Binda O et al. Trimethylation of histone H3 lysine 4 impairs methylation of histone H3 lysine 9: regulation of lysine methyltransferases by physical interaction with their substrates. Epigenetics 5:767-75 (2010). PubMed: 21124070
46. Cao F et al. An Ash2L/RbBP5 heterodimer stimulates the MLL1 methyltransferase activity through coordinated substrate interactions with the MLL1 SET domain. PLoS One 5:e14102 (2010). WB. PubMed: 21124902
47. Dreijerink KM et al. The multiple endocrine neoplasia type 1 (MEN1) tumor suppressor regulates peroxisome proliferator-activated receptor gamma-dependent adipocyte differentiation. Mol Cell Biol 29:5060-9 (2009). PubMed: 19596783
48. Steiner LA et al. Chromatin architecture and transcription factor binding regulate expression of erythrocyte membrane protein genes. Mol Cell Biol 29:5399-412 (2009). ChIP/Chip; Human. PubMed: 19687298
49. Wang P et al. Global analysis of H3K4 methylation defines MLL family member targets and points to a role for MLL1-mediated H3K4 methylation in the regulation of transcriptional initiation by RNA polymerase II. Mol Cell Biol 29:6074-85 (2009). ChIP/Chip; Mouse. PubMed: 19703992
50. Kim D et al. The role of PTIP in maintaining embryonic stem cell pluripotency. Stem Cells 27:1516-23 (2009). WB; Mouse. PubMed: 19544464
51. Miranda TB et al. DZNep is a global histone methylation inhibitor that reactivates developmental genes not silenced by DNA methylation. Mol Cancer Ther 8:1579-88 (2009). ChIP; Human. PubMed: 19509260
52. Pedrosa E et al. Survey of schizophrenia and bipolar disorder candidate genes using chromatin immunoprecipitation and tiled microarrays (ChIP-chip). J Neurogenet 23:341-52 (2009). ChIP/Chip. PubMed: 19225952
53. Liu Y et al. Phosphorylation of the transcription elongation factor Spt5 by yeast Bur1 kinase stimulates recruitment of the PAF complex. Mol Cell Biol 29:4852-63 (2009). ChIP. PubMed: 19581288
54. Shibuya K et al. RNA-directed DNA methylation induces transcriptional activation in plants. Proc Natl Acad Sci U S A 106:1660-5 (2009). ChIP; Plants. PubMed: 19164525
55. Naito M et al. Renal ischemia-induced cholesterol loading: transcription factor recruitment and chromatin remodeling along the HMG CoA reductase gene. Am J Pathol 174:54-62 (2009). ChIP; Mouse. PubMed: 19095962
56. Feng B et al. Reprogramming of fibroblasts into induced pluripotent stem cells with orphan nuclear receptor Esrrb. Nat Cell Biol 11:197-203 (2009). ChIP. PubMed: 19136965
57. Gargiulo G et al. NA-Seq: a discovery tool for the analysis of chromatin structure and dynamics during differentiation. Dev Cell 16:466-81 (2009). ChIP. PubMed: 19289091
58. Schmitz RJ et al. Histone H2B deubiquitination is required for transcriptional activation of FLOWERING LOCUS C and for proper control of flowering in Arabidopsis. Plant Physiol 149:1196-204 (2009). WB; Arabidopsis thaliana. PubMed: 19091875
59. Kim JH et al. Human gamma-satellite DNA maintains open chromatin structure and protects a transgene from epigenetic silencing. Genome Res 19:533-44 (2009). PubMed: 19141594
60. Locatelli S et al. Chromatin and DNA Modifications in the Opaque2-Mediated Regulation of Gene Transcription during Maize Endosperm Development. Plant Cell : (2009). PubMed: 19482970
61. Hurd PJ et al. Phosphorylation of histone H3 Thr-45 is linked to apoptosis. J Biol Chem 284:16575-83 (2009). WB; Human. PubMed: 19363025
62. Hammoud SS et al. Distinctive chromatin in human sperm packages genes for embryo development. Nature 460:473-8 (2009). ChIP; Human. PubMed: 19525931
63. Mravinac B et al. Histone modifications within the human X centromere region. PLoS One 4:e6602 (2009). ChIP; Human. PubMed: 19672304
64. Makkonen H et al. Long-range activation of FKBP51 transcription by the androgen receptor via distal intronic enhancers. Nucleic Acids Res 37:4135-48 (2009). ChIP. PubMed: 19433513
65. Caslini C et al. MLL associates with telomeres and regulates telomeric repeat-containing RNA transcription. Mol Cell Biol 29:4519-26 (2009). PubMed: 19528237
66. Pandorf CE et al. Differential epigenetic modifications of histones at the myosin heavy chain genes in fast and slow skeletal muscle fibers and in response to muscle unloading. Am J Physiol Cell Physiol 297:C6-16 (2009). ChIP. PubMed: 19369448
67. Egloff S et al. Chromatin structure is implicated in "late" elongation checkpoints on the U2 snRNA and beta-actin genes. Mol Cell Biol 29:4002-13 (2009). ChIP; Human. PubMed: 19451231
68. Tamada Y et al. ARABIDOPSIS TRITHORAX-RELATED7 is required for methylation of lysine 4 of histone H3 and for transcriptional activation of FLOWERING LOCUS C. Plant Cell 21:3257-69 (2009). PubMed: 19855050
69. Li C et al. Regulation of oleosin expression in developing peanut (Arachis hypogaea L.) embryos through nucleosome loss and histone modifications. J Exp Bot 60:4371-82 (2009). PubMed: 19737778
70. Jacinto FV et al. Impaired recruitment of the histone methyltransferase DOT1L contributes to the incomplete reactivation of tumor suppressor genes upon DNA demethylation. Oncogene 28:4212-24 (2009). ChIP; Human. PubMed: 19734945
71. Lee JH & Skalnik DG Wdr82 is a C-terminal domain-binding protein that recruits the Setd1A Histone H3-Lys4 methyltransferase complex to transcription start sites of transcribed human genes. Mol Cell Biol 28:609-18 (2008). ChIP; Human. PubMed: 17998332
72. Casas-Mollano JA et al. The MUT9p kinase phosphorylates histone H3 threonine 3 and is necessary for heritable epigenetic silencing in Chlamydomonas. Proc Natl Acad Sci U S A 105:6486-91 (2008). WB, ChIP; Chlamydomonas reinhardtii. PubMed: 18420823
73. Akimzhanov A et al. Epigenetic changes and suppression of the nuclear factor of activated T cell 1 (NFATC1) promoter in human lymphomas with defects in immunoreceptor signaling. Am J Pathol 172:215-24 (2008). ChIP; Human. PubMed: 18156209
74. Casas-Mollano JA et al. Diversification of the core RNA interference machinery in Chlamydomonas reinhardtii and the role of DCL1 in transposon silencing. Genetics 179:69-81 (2008). PubMed: 18493041
75. Walter K et al. Stem cell specific epigenetic priming and B cell specific transcriptional activation at the mouse Cd19 locus. Blood : (2008). PubMed: 18552207
76. Ceribelli M et al. The histone-like NF-Y is a bifunctional transcription factor. Mol Cell Biol 28:2047-58 (2008). ChIP. PubMed: 18212061
77. Meissner A et al. Genome-scale DNA methylation maps of pluripotent and differentiated cells. Nature : (2008). ChIP; Mouse. PubMed: 18600261
78. Corry GN et al. Subnuclear localization and mobility are key indicators of PAX3 dysfunction in Waardenburg syndrome. Hum Mol Genet 17:1825-37 (2008). PubMed: 18325909
79. Schotta G et al. A chromatin-wide transition to H4K20 monomethylation impairs genome integrity and programmed DNA rearrangements in the mouse. Genes Dev 22:2048-61 (2008). ChIP; Mouse. PubMed: 18676810
80. Seneda MM et al. Developmental regulation of histone H3 methylation at lysine 4 in the porcine ovary. Reproduction 135:829-38 (2008). IHC-P; Pig. PubMed: 18502896
81. Lopez-Bigas N et al. Genome-wide analysis of the H3K4 histone demethylase RBP2 reveals a transcriptional program controlling differentiation. Mol Cell 31:520-30 (2008). PubMed: 18722178
82. Chou SD & Tomasi TB Spatial distribution of histone methylation during MHC class II expression. Mol Immunol 45:971-80 (2008). PubMed: 17850872
83. Shema E et al. The histone H2B-specific ubiquitin ligase RNF20/hBRE1 acts as a putative tumor suppressor through selective regulation of gene expression. Genes Dev 22:2664-76 (2008). ChIP/Chip; Human. PubMed: 18832071
84. Dutta D et al. Activation of the VEGFR1 chromatin domain: an angiogenic signal-ETS1/HIF-2alpha regulatory axis. J Biol Chem 283:25404-13 (2008). ChIP; Human. PubMed: 18625704
85. Taylor JM et al. Chromatin profiling across the human tumour necrosis factor gene locus reveals a complex, cell type-specific landscape with novel regulatory elements. Nucleic Acids Res 36:4845-62 (2008). ChIP; Human. PubMed: 18653526
86. Chowdhury M et al. Analysis of intergenic transcription and histone modification across the human immunoglobulin heavy-chain locus. Proc Natl Acad Sci U S A 105:15872-7 (2008). ChIP; Human. PubMed: 18836073
87. Oh S et al. Genic and global functions for Paf1C in chromatin modification and gene expression in Arabidopsis. PLoS Genet 4:e1000077 (2008). ChIP; Arabidopsis thaliana. PubMed: 18725930
88. Duncan EM et al. Cathepsin L proteolytically processes histone H3 during mouse embryonic stem cell differentiation. Cell 135:284-94 (2008). WB; Mouse. PubMed: 18957203
89. Lim CY et al. Sall4 regulates distinct transcription circuitries in different blastocyst-derived stem cell lineages. Cell Stem Cell 3:543-54 (2008). ChIP; Mouse. PubMed: 18804426
90. Lagarou A et al. dKDM2 couples histone H2A ubiquitylation to histone H3 demethylation during Polycomb group silencing. Genes Dev 22:2799-810 (2008). WB; Fruit fly (Drosophila melanogaster). PubMed: 18923078
91. Vitaliano-Prunier A et al. Ubiquitylation of the COMPASS component Swd2 links H2B ubiquitylation to H3K4 trimethylation. Nat Cell Biol 10:1365-71 (2008). WB; Saccharomyces cerevisiae. PubMed: 18849979
92. Zhu ED et al. Wdr5 is essential for osteoblast differentiation. J Biol Chem 283:7361-7 (2008). WB; Mouse. PubMed: 18201971
93. Lloret-Llinares M et al. Characterization of Drosophila melanogaster JmjC+N histone demethylases. Nucleic Acids Res : (2008). ICC/IF; Fruit fly (Drosophila melanogaster). PubMed: 18375980
94. Dahl JA & Collas P MicroChIP--a rapid micro chromatin immunoprecipitation assay for small cell samples and biopsies. Nucleic Acids Res 36:e15 (2008). ChIP; Human. PubMed: 18202078
95. Ekici M et al. Transcription of Genes Encoding Synaptic Vesicle Proteins in Human Neural Stem Cells: CHROMATIN ACCESSIBILITY, HISTONE METHYLATION PATTERN, AND THE ESSENTIAL ROLE OF REST. J Biol Chem 283:9257-68 (2008). ChIP; Human. PubMed: 18234667
96. Smith AE et al. Heritable Gene Repression through the Action of a Directed DNA Methyltransferase at a Chromosomal Locus. J Biol Chem 283:9878-85 (2008). ChIP; Mouse. PubMed: 18272522
97. Respuela P et al. Histone acetylation and methylation at sites initiating divergent polycistronic transcription in trypanosoma cruzi. J Biol Chem : (2008). ChIP; Tetrahymena sp., Trypanosoma cruzi. PubMed: 18400752
98. Dunican DS et al. xDnmt1 regulates transcriptional silencing in pre-MBT Xenopus embryos independently of its catalytic function. Development 135:1295-302 (2008). WB. PubMed: 18305009
99. Lupien M et al. FoxA1 translates epigenetic signatures into enhancer-driven lineage-specific transcription. Cell 132:958-70 (2008). ChIP; Human. PubMed: 18358809
100. Williams A et al. Position effect variegation and imprinting of transgenes in lymphocytes. Nucleic Acids Res 36:2320-9 (2008). ChIP; Mouse. PubMed: 18296483
101. Donati G et al. An NF-Y-dependent switch of positive and negative histone methyl marks on CCAAT promoters. PLoS ONE 3:e2066 (2008). ChIP; Human. PubMed: 18446193
102. Bonnefoy E et al. The essential role of Drosophila HIRA for de novo assembly of paternal chromatin at fertilization. PLoS Genet 3:1991-2006 (2007). IHC-Fr; Fruit fly (Drosophila melanogaster). PubMed: 17967064
103. Klose RJ et al. The retinoblastoma binding protein RBP2 is an H3K4 demethylase. Cell 128:889-900 (2007). WB. PubMed: 17320163
104. Demers C et al. Activator-mediated recruitment of the MLL2 methyltransferase complex to the beta-globin locus. Mol Cell 27:573-84 (2007). ChIP; Mouse. PubMed: 17707229
105. Altaf M et al. Interplay of chromatin modifiers on a short basic patch of histone H4 tail defines the boundary of telomeric heterochromatin. Mol Cell 28:1002-14 (2007). WB; Saccharomyces cerevisiae. PubMed: 18158898
106. Kinyamu HK & Archer TK Proteasome activity modulates chromatin modifications and RNA polymerase II phosphorylation to enhance glucocorticoid receptor-mediated transcription. Mol Cell Biol 27:4891-904 (2007). WB; Human. PubMed: 17438138
107. Attema JL et al. Epigenetic characterization of hematopoietic stem cell differentiation using miniChIP and bisulfite sequencing analysis. Proc Natl Acad Sci U S A 104:12371-6 (2007). ChIP. PubMed: 17640913
108. Liu C et al. Transcriptional coactivator PGC-1alpha integrates the mammalian clock and energy metabolism. Nature 447:477-81 (2007). PubMed: 17476214
109. Kirmizis A et al. Arginine methylation at histone H3R2 controls deposition of H3K4 trimethylation. Nature 449:928-32 (2007). WB; Saccharomyces cerevisiae. PubMed: 17898715
110. Guccione E et al. Methylation of histone H3R2 by PRMT6 and H3K4 by an MLL complex are mutually exclusive. Nature 449:933-7 (2007). ChIP; Human. PubMed: 17898714
111. Chang B et al. JMJD6 is a histone arginine demethylase. Science 318:444-7 (2007). WB, ICC/IF; Human. PubMed: 17947579
112. Vaquero A et al. SIRT1 regulates the histone methyl-transferase SUV39H1 during heterochromatin formation. Nature 450:440-4 (2007). ICC/IF; Mouse. PubMed: 18004385
113. De Santa F et al. The histone H3 lysine-27 demethylase Jmjd3 links inflammation to inhibition of polycomb-mediated gene silencing. Cell 130:1083-94 (2007). WB, ChIP; Human. PubMed: 17825402
114. Andersen EC & Horvitz HR Two C. elegans histone methyltransferases repress lin-3 EGF transcription to inhibit vulval development. Development 134:2991-9 (2007). WB; Caenorhabditis elegans. PubMed: 17634190
115. Yokoyama R et al. A plasmid model system shows that Drosophila dosage compensation depends on the global acetylation of histone H4 at lysine 16 and is not affected by depletion of common transcription elongation chromatin marks. Mol Cell Biol 27:7865-70 (2007). PubMed: 17875941
116. Hoogenkamp M et al. The Pu.1 locus is differentially regulated at the level of chromatin structure and noncoding transcription by alternate mechanisms at distinct developmental stages of hematopoiesis. Mol Cell Biol 27:7425-38 (2007). PubMed: 17785440
117. Aguilera O et al. The Wnt antagonist DICKKOPF-1 gene is induced by 1alpha,25-dihydroxyvitamin D3 associated to the differentiation of human colon cancer cells. Carcinogenesis 28:1877-84 (2007). PubMed: 17449905
118. Schnekenburger M et al. Chromium cross-links histone deacetylase 1-DNA methyltransferase 1 complexes to chromatin, inhibiting histone-remodeling marks critical for transcriptional activation. Mol Cell Biol 27:7089-101 (2007). ChIP; Mouse. PubMed: 17682057
119. Sarcinella E et al. Monoubiquitylation of H2A.Z distinguishes its association with euchromatin or facultative heterochromatin. Mol Cell Biol 27:6457-68 (2007). WB; Human. PubMed: 17636032
120. Sullivan KE et al. Epigenetic regulation of tumor necrosis factor alpha. Mol Cell Biol 27:5147-60 (2007). ChIP; Human. PubMed: 17515611
121. Wöhrle S et al. Differential control of Wnt target genes involves epigenetic mechanisms and selective promoter occupancy by T-cell factors. Mol Cell Biol 27:8164-77 (2007). PubMed: 17923689
122. Yagi R et al. Regulation of the Il4 gene is independently controlled by proximal and distal 3' enhancers in mast cells and basophils. Mol Cell Biol 27:8087-97 (2007). PubMed: 17908791
123. Godmann M et al. Dynamic regulation of histone H3 methylation at lysine 4 in mammalian spermatogenesis. Biol Reprod 77:754-64 (2007). IHC-P; Mouse. PubMed: 17634443
124. Barski A et al. High-resolution profiling of histone methylations in the human genome. Cell 129:823-37 (2007). PubMed: 17512414
125. Brinkman AB et al. DNA methylation immediately adjacent to active histone marking does not silence transcription. Nucleic Acids Res 35:801-11 (2007). PubMed: 17202157
126. Freberg CT et al. Epigenetic Reprogramming of OCT4 and NANOG regulatory regions by embryonal carcinoma cell extract. Mol Biol Cell 18:1543-53 (2007). PubMed: 17314394
127. Dahl JA & Collas P Q2ChIP, a quick and quantitative chromatin immunoprecipitation assay, unravels epigenetic dynamics of developmentally regulated genes in human carcinoma cells. Stem Cells 25:1037-46 (2007). PubMed: 17272500
128. Villa R et al. Role of the polycomb repressive complex 2 in acute promyelocytic leukemia. Cancer Cell 11:513-25 (2007). PubMed: 17560333
129. Rathke C et al. Transition from a nucleosome-based to a protamine-based chromatin configuration during spermiogenesis in Drosophila. J Cell Sci 120:1689-700 (2007). PubMed: 17452629
130. Tesar PJ et al. New cell lines from mouse epiblast share defining features with human embryonic stem cells. Nature 448:196-9 (2007). PubMed: 17597760
131. Tavner F et al. Targeting an E2F site in the mouse genome prevents promoter silencing in quiescent and post-mitotic cells. Oncogene 26:2727-35 (2007). PubMed: 17072340
132. Lubitz S et al. Increased apoptosis and skewed differentiation in mouse embryonic stem cells lacking the histone methyltransferase Mll2. Mol Biol Cell 18:2356-66 (2007). PubMed: 17429066
133. Yee LF et al. Ectopic expression of HCMV IE72 and IE86 proteins is sufficient to induce early gene expression but not production of infectious virus in undifferentiated promonocytic THP-1 cells. Virology 363:174-88 (2007). PubMed: 17331553
134. Rybtsova N et al. Transcription-coupled deposition of histone modifications during MHC class II gene activation. Nucleic Acids Res 35:3431-41 (2007). PubMed: 17478518
135. Chen L et al. Widespread, exceptionally high levels of histone H3 lysine 4 trimethylation largely mediate "privileged" gene expression. Gene Expr 13:271-82 (2007). PubMed: 17605300
136. Mikkelsen TS et al. Genome-wide maps of chromatin state in pluripotent and lineage-committed cells. Nature 448:553-60 (2007). PubMed: 17603471
137. Guenther MG et al. A chromatin landmark and transcription initiation at most promoters in human cells. Cell 130:77-88 (2007). ChIP/Chip; Human. PubMed: 17632057
138. Tanaka T et al. hCAS/CSE1L associates with chromatin and regulates expression of select p53 target genes. Cell 130:638-50 (2007). ChIP; Human. PubMed: 17719542
139. Vermeulen M et al. Selective anchoring of TFIID to nucleosomes by trimethylation of histone H3 lysine 4. Cell 131:58-69 (2007). WB; Human. PubMed: 17884155
140. Krejcí A & Bray S Notch activation stimulates transient and selective binding of Su(H)/CSL to target enhancers. Genes Dev 21:1322-7 (2007). ChIP; Fruit fly (Drosophila melanogaster). PubMed: 17545467
141. Hayakawa T et al. RBP2 is an MRG15 complex component and down-regulates intragenic histone H3 lysine 4 methylation. Genes Cells 12:811-26 (2007). WB; Human. PubMed: 17573780
142. Koch CM et al. The landscape of histone modifications across 1% of the human genome in five human cell lines. Genome Res 17:691-707 (2007). ChIP/Chip; Human. PubMed: 17567990
143. Taverna SD et al. Long-distance combinatorial linkage between methylation and acetylation on histone H3 N termini. Proc Natl Acad Sci U S A 104:2086-91 (2007). WB; Tetrahymena sp.. PubMed: 17284592
144. Bracken AP et al. The Polycomb group proteins bind throughout the INK4A-ARF locus and are disassociated in senescent cells. Genes Dev 21:525-30 (2007). ChIP; Human. PubMed: 17344414
145. Krysinska H et al. A two-step, PU.1-dependent mechanism for developmentally regulated chromatin remodeling and transcription of the c-fms gene. Mol Cell Biol 27:878-87 (2007). ChIP; Mouse. PubMed: 17116688
146. Chow JC et al. Inducible XIST-dependent X-chromosome inactivation in human somatic cells is reversible. Proc Natl Acad Sci U S A 104:10104-9 (2007). ChIP; Human. PubMed: 17537922
147. Rangwala SH & Richards EJ Differential epigenetic regulation within an Arabidopsis retroposon family. Genetics 176:151-60 (2007). ChIP; Arabidopsis thaliana. PubMed: 17339215
148. Hattori N et al. Epigenetic regulation of Nanog gene in embryonic stem and trophoblast stem cells. Genes Cells 12:387-96 (2007). ChIP; Mouse. PubMed: 17352742
149. Lujambio A et al. Genetic unmasking of an epigenetically silenced microRNA in human cancer cells. Cancer Res 67:1424-9 (2007). PubMed: 17308079
150. Cooper SJ et al. Serum response factor binding sites differ in three human cell types. Genome Res 17:136-44 (2007). ChIP; Human. PubMed: 17200232
151. Abarrategui I & Krangel MS Noncoding transcription controls downstream promoters to regulate T-cell receptor alpha recombination. EMBO J 26:4380-90 (2007). ChIP; Mouse. PubMed: 17882258
152. Denissov S et al. Identification of novel functional TBP-binding sites and general factor repertoires. EMBO J 26:944-54 (2007). Human. PubMed: 17268553
153. Agger K et al. UTX and JMJD3 are histone H3K27 demethylases involved in HOX gene regulation and development. Nature 449:731-4 (2007). WB, ChIP; Mouse. PubMed: 17713478
154. Pickersgill H et al. Characterization of the Drosophila melanogaster genome at the nuclear lamina. Nat Genet 38:1005-14 (2006). PubMed: 16878134
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